Publications 2014

Abd El-Wahab, E. W., R. P. Smyth, E. Mailler, S. Bernacchi, V. Vivet-Boudou, M. Hijnen, F. Jossinet, J. Mak, J.-C. Paillart, and R. Marquet. 2014. Specific recognition of the hiv-1 genomic rna by the gag precursor. Nature Communications 5.

Alexandersen, S., Kobinger, G.P., Soule, G., and Wernery, U.: Middle East Respiratory Syndrome coronavirus antibody reactors among camels in Dubai, United Arab Emirates, in 2005. Transbound. Emerg. Dis. 61:105-108, 2014.

Athan, E. 2014. The characteristics and outcome of infective endocarditis involving implantable cardiac devices. Current Infectious Disease Reports 16.

Bagherlrad, M., P. Trevan, M. Globan, E. Tay, N. Stephens, and E. Athan. 2014. Transmission of tuberculosis infection in a commercial office. Medical Journal of Australia 200:177-179.

Berk, M., J. A. Pasco, F. N. Jacka, J. M. Hodge, A. Stuart, A. Torpy, S. Dodd, L. Williams, and Y. Gilbert. 2014a. Osteoporosis: A neglected medical co-morbidity in mood disorders. Bipolar Disorders 16:79-79.

Berk, M., L. J. Williams, A. C. Andreazza, J. A. Pasco, S. Dodd, F. N. Jacka, S. Moylan, E. J. Reiner, and P. V. S. Magalhaes. 2014b. Pop, heavy metal and the blues: Secondary analysis of persistent organic pollutants (pop), heavy metals and depressive symptoms in the nhanes national epidemiological survey. Bmj Open 4.

Brennan, S. L., S. E. Lane, M. Lorimer, R. Buchbinder, A. E. Wluka, R. S. Page, R. H. Osborne, J. A. Pasco, K. M. Sanders, K. Cashman, P. R. Ebeling, and S. E. Graves. 2014a. Associations between socioeconomic status and primary total knee joint replacements performed for osteoarthritis across australia 2003-10: Data from the australian orthopaedic association national joint replacement registry. Bmc Musculoskeletal Disorders 15.

Brennan, S. L., L. Toomey, M. A. Kotowicz, M. J. Henry, H. Griffiths, and J. A. Pasco. 2014b. Rheumatoid arthritis and incident fracture in women: A case-control study. Bmc Musculoskeletal Disorders 15.

Burggraaf, S., A. J. Karpala, J. Bingham, S. Lowther, P. Selleck, W. Kimpton, and A. G. D. Bean. 2014. H5n1 infection causes rapid mortality and high cytokine levels in chickens compared to ducks. Virus Research 185:23-31.

Chang, C. C., M. Ananda-Rajah, A. Belcastro, B. McMullan, A. Reid, K. Dempsey, E. Athan, A. C. Cheng, and M. A. Slavin. 2014. Consensus guidelines for implementation of quality processes to prevent invasive fungal disease and enhanced surveillance measures during hospital building works, 2014. Internal Medicine Journal 44:1389-1397.

Clayton, B. A., and G. A. Marsh. 2014. Nipah viruses from malaysia and bangladesh: Two of a kind? Future Virology 9:935-946.

Cowled, C., C. R. Stewart, V. A. Likic, M. R. Friedlaender, M. Tachedjian, K. A. Jenkins, M. L. Tizard, P. Cottee, G. A. Marsh, P. Zhou, M. L. Baker, A. G. Bean, and L.-f. Wang. 2014. Characterisation of novel micrornas in the black flying fox (pteropus alecto) by deep sequencing. Bmc Genomics 15.

De Barro, P., S. Goldson, D. Bartsch, M. Hirsch, M. Jeggo, J. W. Lowenthal, P. Macdonald, R. R. J. McAllister, R. McCrea, F. McFarlane, C. Robinson, K. Ritman, J. Smith, R. Van Klinken, I. Walker, J. R. Alexandre, S. Barry, C. Beech, C. Cormick, P. Kearns, Q. Liang, A. Mankad, S. McCammon, S. Mestdagh, S. Tapsuwan, and A. Walton. 2014. Science into policy; improving uptake and adoption of research: Outcomes and conclusions. Journal Fur Verbraucherschutz Und Lebensmittelsicherheit-Journal of Consumer Protection and Food Safety 9:S1-S6.

Dipnall, J. F., M. Berk, F. N. Jacka, L. J. Williams, S. Dodd, and J. A. Pasco. 2014. Data integration protocol in ten-steps (dipit): A new standard for medical researchers. Methods 69:237-246.

Dobbins, A. G., S. L. Brennan, L. J. Williams, K. L. Holloway, and J. A. Pasco. 2014. Adulthood fracture and quality of life: A population-based study of australian men. Journal of Mens Health 11:171-176.

Doran, T. J., S. G. Tyack, K. A. Jenkins, T. E. O’Neil, T. G. Wise, K. R. Morris, M. P. Bruce, S. McLeod, A. J. Wade, J. McKay, R. J. Moore, K. A. Schat, and J. W. Lowenthal. 2014. A new method for producing transgenic birds via direct in vivo transfection of primordial germ cells. Transgenic Research 23:195-196.

Dups, J., D. Middleton, F. Long, R. Arkinstall, G. A. Marsh, and L.-F. Wang. 2014. Subclinical infection without encephalitis in mice following intranasal exposure to nipah virus-malaysia and nipah virus-bangladesh. Virology Journal 11.

Entesari-Tatafi, D., M. Bagherirad, D. Quan, and E. Athan. 2014. Iatrogenic meningitis caused by neisseria sicca/subflava after intrathecal contrast injection, australia. Emerging Infectious Diseases 20:1023-1025.

Goossens, K. E., A. J. Karpala, A. Ward, and A. G. D. Bean. 2014. Characterisation of chicken zap. Developmental and Comparative Immunology 46:373-381.

Gould, H., S. L. Brennan, M. A. Kotowicz, G. C. Nicholson, and J. A. Pasco. 2014. Total and appendicular lean mass reference ranges for australian men and women: The geelong osteoporosis study. Calcified Tissue International 94:363-372.

Hayley, A. C., L. J. Williams, G. A. Kennedy, M. Berk, S. L. Brennan, and J. A. Pasco. 2014a. Excessive daytime sleepiness and body composition: A population-based study of adults. Plos One 9.

Hayley, A. C., L. J. Williams, G. A. Kennedy, M. Berk, S. L. Brennan, and J. A. Pasco. 2014b. Prevalence of excessive daytime sleepiness in a sample of the australian adult population. Sleep Medicine 15:348-354.

Hayley, A. C., L. J. Williams, G. A. Kennedy, M. Berk, and J. A. Pasco. 2014c. Excessive daytime sleepiness and metabolic syndrome: A population-based study of women. Journal of Sleep Research 23:288-288.

Izzard, L., R. A. Tripp, and J. Stambas. 2014a. Can an influenza a-based delivery system overcome current challenges associated with mirna technology? Future Virology 9:879-882.

Izzard, L., S. Ye, K. Jenkins, Y. Xia, M. Tizard, and J. Stambas. 2014b. Mirna modulation of socs1 using an influenza a virus delivery system. Journal of General Virology 95:1880-1885.

Jeggo, M. 2014. Science delivering to regulators. Journal Fur Verbraucherschutz Und Lebensmittelsicherheit-Journal of Consumer Protection and Food Safety 9:S19-S23.

Johansson, H., J. A. Kanis, A. Oden, E. McCloskey, R. D. Chapurlat, C. Christiansen, S. R. Cummings, A. Diez-Perez, J. A. Eisman, S. Fujiwara, C.-C. Glueer, D. Goltzman, D. Hans, K.-T. Khaw, M.-A. Krieg, H. Kroeger, A. Z. LaCroix, E. Lau, W. D. Leslie, D. Mellstroem, L. J. Melton, III, T. W. O’Neill, J. A. Pasco, J. C. Prior, D. M. Reid, F. Rivadeneira, T. van Staa, N. Yoshimura, and M. C. Zillikens. 2014. A meta-analysis of the association of fracture risk and body mass index in women. Journal of Bone and Mineral Research 29:223-233.

Kumar, J., F. W. Fraser, C. Riley, N. Ahmed, D. R. McCulloch, and A. C. Ward. 2014. Granulocyte colony-stimulating factor receptor signalling via janus kinase 2/signal transducer and activator of transcription 3 in ovarian cancer. British Journal of Cancer 110:133-145.

Kumar, J., and A. C. Ward. 2014. Role of the interleukin 6 receptor family in epithelial ovarian cancer and its clinical implications. Biochimica Et Biophysica Acta-Reviews on Cancer 1845:117-125.

Lewis, R. S., S. M. Noor, F. W. Fraser, R. Sertori, C. Liongue, and A. C. Ward. 2014. Regulation of embryonic hematopoiesis by a cytokine-inducible sh2 domain homolog in zebrafish. Journal of Immunology 192:5739-5748.

Liu, Y., M. M. Hefting, J. T. A. Verhoeven, and M. Klaassen. 2014. Nutrient release characteristics from droppings of grass-foraging waterfowl (anser brachyrhynchus) roosting in aquatic habitats. Ecohydrology 7:1216-1222.

Lowenthal, J. W. 2014. Confidence in genetically modified animal research and regulation. Journal Fur Verbraucherschutz Und Lebensmittelsicherheit-Journal of Consumer Protection and Food Safety 9:S47-S50.

Marsh, G. A., and L.-F. Wang. 2014. Henipaviruses deadly zoonotic paramyxoviruses of bat origin. Role of Animals in Emerging Viral Diseases:125-142.

McKinstry, W. J., M. Hijnen, H. S. Tanwar, L. G. Sparrow, S. Nagarajan, S. T. Pham, and J. Mak. 2014. Expression and purification of soluble recombinant full length hiv-1 pr55(gag) protein in escherichia coli. Protein Expression and Purification 100:10-18.

Middleton, D., J. Pallister, R. Klein, Y.-R. Feng, J. Haining, R. Arkinstall, L. Frazer, J.-A. Huang, N. Edwards, M. Wareing, M. Elhay, Z. Hashmi, J. Bingham, M. Yamada, D. Johnson, J. White, A. Foord, H. G. Heine, G. A. Marsh, C. C. Broder, and L.-F. Wang. 2014. Hendra virus vaccine, a one health approach to protecting horse, human, and environmental health. Emerging Infectious Diseases 20:372-379.

Monne, I., A. Fusaro, M. I. Nelson, L. Bonfanti, P. Mulatti, J. Hughes, P. R. Murcia, A. Schivo, V. Valastro, A. Moreno, E. C. Holmes, and G. Cattolia. 2014. Emergence of a highly pathogenic avian influenza virus from a low-pathogenic progenitor. Journal of Virology 88:4375-4388.

Moylan, S., M. Berk, O. M. Dean, Y. Samuni, L. J. Williams, A. O’Neil, A. C. Hayley, J. A. Pasco, G. Anderson, F. N. Jacka, and M. Maes. 2014. Oxidative & nitrosative stress in depression: Why so much stress? Neuroscience and Biobehavioral Reviews 45:46-62.

O’Brien, D. P., N. D. Friedman, A. McDonald, P. Callan, A. Hughes, and E. Athan. 2014a. Clinical features and risk factors of oedematous mycobacterium ulcerans lesions in an australian population: Beware cellulitis in an endemic area. PLoS neglected tropical diseases 8.

O’Brien, D. P., G. Jenkin, J. Buntine, C. M. Steffen, A. McDonald, S. Horne, N. D. Friedman, E. Athan, A. Hughes, P. P. Callan, and P. D. R. Johnson. 2014b. Treatment and prevention of mycobacterium ulcerans infection (buruli ulcer) in australia: Guideline update. Medical Journal of Australia 200:267-270.

O’Neil, A., S. E. Quirk, S. Housden, S. L. Brennan, L. J. Williams, J. A. Pasco, M. Berk, and F. N. Jacka. 2014. Relationship between diet and mental health in children and adolescents: A systematic review. American Journal of Public Health 104:E31-E42.

Pasco, J. A., H. Gould, S. L. Brennan, G. C. Nicholson, and M. A. Kotowicz. 2014a. Musculoskeletal deterioration in men accompanies increases in body fat. Obesity 22:863-867.

Pasco, J. A., S. E. Lane, S. L. Brennan, K. L. Holloway, G. Bucki-Smith, and M. A. Kotowicz. 2014b. Appendicular lean mass and the risk for hip and upper limb fractures. Osteoporosis International 25:631-631.

Pasco, J. A., S. E. Lane, S. L. Brennan, E. N. Timney, G. Bucki-Smith, A. G. Dobbins, G. C. Nicholson, and M. A. Kotowicz. 2014c. Fracture risk among older men: Osteopenia and osteoporosis defined using cut-points derived from female versus male reference data. Osteoporosis International 25:857-862.

Pasick, J., Berhane, Y., Ojkic, D., Maxie, G., Embury-Hyatta, C., Swekla, K., Handel, K., Fairles, J., and Alexandersen, S.: Investigation into the Role of Potentially Contaminated Feed as a Source of the First Detected Outbreaks of Porcine Epidemic Diarrhea in Canada. Transbound. Emerg. Dis. 61:397–410, 2014.

Petravic, J., P. Ellenberg, M.-L. Chan, G. Paukovics, R. P. Smyth, J. Mak, and M. P. Davenport. 2014. Intracellular dynamics of hiv infection. Journal of Virology 88:1113-1124.

Pham, S., T. Tabarin, C. Pade, J. Rossy, P. Monaghan, A. Hyatt, T. Boecking, A. Leis, K. Gaus, and J. Mak. 2014. Cd4 receptor-engagement induces structural rearrangement of hiv. Abstracts of the General Meeting of the American Society for Microbiology 114:2682-2682.

Rogers, B. A., P. R. Ingram, N. Runnegar, M. C. Pitman, J. T. Freeman, E. Athan, S. M. Havers, H. E. Sidjabat, M. Jones, E. Gunning, M. De Almeida, K. Styles, D. L. Paterson, and C. Australasian Soc Infect Dis. 2014. Community-onset escherichia coli infection resistant to expanded-spectrum cephalosporins in low-prevalence countries. Antimicrobial Agents and Chemotherapy 58:2126-2134.

Sanna, L., A. L. Stuart, J. A. Pasco, F. N. Jacka, M. Berk, M. Maes, A. O’Neill, P. Girardi, and L. J. Williams. 2014a. Atopic disorders and depression: Findings from a large, population-based study. Journal of Affective Disorders 155:261-265.

Sanna, L., A. L. Stuart, J. A. Pasco, M. A. Kotowicz, M. Berk, P. Girardi, and L. J. Williams. 2014b. Suicidal ideation and physical illness: Does the link lie with depression? Journal of Affective Disorders 152:422-426.

Schlub, T. E., A. J. Grimm, R. P. Smyth, D. Cromer, A. Chopra, S. Mallal, V. Venturi, C. Waugh, J. Mak, and M. P. Davenport. 2014. Fifteen to twenty percent of hiv substitution mutations are associated with recombination. Journal of Virology 88:3837-3849.

Simms, L., and M. Jeggo. 2014. Avian influenza from an ecohealth perspective. Ecohealth 11:4-14.

Smyth, R. P., T. E. Schlub, A. J. Grimm, C. Waugh, P. Ellenberg, A. Chopra, S. Mallal, D. Cromer, J. Mak, and M. P. Davenport. 2014. Identifying recombination hot spots in the hiv-1 genome. Journal of Virology 88:2891-2902.

Stuart, A. L., J. A. Pasco, F. N. Jacka, S. L. Brennan, M. Berk, and L. J. Williams. 2014. Comparison of self-report and structured clinical interview in the identification of depression. Comprehensive Psychiatry 55:866-869.

van Dijk, J. G. B., B. J. Hoye, J. H. Verhagen, B. A. Nolet, R. A. M. Fouchier, and M. Klaassen. 2014a. Juveniles and migrants as drivers for seasonal epizootics of avian influenza virus. Journal of Animal Ecology 83:266-275.

van Dijk, J. G. B., A. C. Mateman, and M. Klaassen. 2014b. Transfer of maternal antibodies against avian influenza virus in mallards (anas platyrhynchos). Plos One 9.

van Dijk, J. G. B., W. Meissner, and M. Klaassen. 2014c. Improving provenance studies in migratory birds when using feather hydrogen stable isotopes. Journal of Avian Biology 45:103-108.

Veen, T., M. B. Hjernquist, S. L. Van Wilgenburg, K. A. Hobson, E. Folmer, L. Font, and M. Klaassen. 2014. Identifying the african wintering grounds of hybrid flycatchers using a multi-isotope (delta h-2, delta c-13, delta n-15) assignment approach. Plos One 9.

Velkov, T., V. Carbone, J. Akter, S. Sivanesan, J. Li, T. Beddoe, and G. A. Marsh. 2014. The rna-dependent-rna polymerase, an emerging antiviral drug target for the hendra virus. Current Drug Targets 15:103-113.

Verhagen, J. H., J. G. B. van Dijk, V. Oanh, T. Bestebroer, P. Lexmond, M. Klaassen, and R. A. M. Fouchier. 2014. Migratory birds reinforce local circulation of avian influenza viruses. Plos One 9.

Williams, L. J., M. Berk, M. J. Henry, A. L. Stuart, S. L. Brennan, F. N. Jacka, and J. A. Pasco. 2014. Depression following fracture in women: A study of age-matched cohorts. Bmj Open 4.

Wynne, J. W., B. J. Shiell, G. A. Marsh, V. Boyd, J. A. Harper, K. Heesom, P. Monaghan, P. Zhou, J. Payne, R. Klein, S. Todd, L. Mok, D. Green, J. Bingham, M. Tachedjian, M. L. Baker, D. Matthews, and L.-F. Wang. 2014. Proteomics informed by transcriptomics reveals hendra virus sensitizes bat cells to trail-mediated apoptosis. Genome Biology 15.

Ye, S., J. G. Evans, and J. Stambas. 2014. Influenza reverse genetics: Dissecting immunity and pathogenesis. Expert Reviews in Molecular Medicine 16.